STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016288Uncharacterized protein. (534 aa)    
Predicted Functional Partners:
CCH79_00002581
Uncharacterized protein.
   
 
 0.620
CCH79_00012465
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.579
CCH79_00012863
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.536
CCH79_00013654
Uncharacterized protein.
     
 0.515
CCH79_00019835
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.456
CCH79_00014098
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.456
CCH79_00007402
Uncharacterized protein.
     
 0.448
CCH79_00019499
SAC domain-containing protein.
     
 0.427
CCH79_00019497
SAC domain-containing protein.
     
 0.427
CCH79_00018798
SAC domain-containing protein.
     
 0.427
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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