STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012060Uncharacterized protein. (1704 aa)    
Predicted Functional Partners:
CCH79_00001604
Uncharacterized protein.
   
  0.842
CCH79_00012066
Uncharacterized protein.
   
  
0.765
CCH79_00015591
Uncharacterized protein; Belongs to the peptidase C2 family.
   
 0.658
CCH79_00006122
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 
 0.621
CCH79_00002878
Uncharacterized protein.
   
   0.605
CCH79_00000373
Uncharacterized protein.
    
  0.598
CCH79_00002909
Uncharacterized protein.
    
  0.583
ENSGAFP00000015861
E1A binding protein p300 b.
   
  0.568
CCH79_00008919
Uncharacterized protein.
   
  0.547
CCH79_00005125
Alpha-carbonic anhydrase domain-containing protein.
      
 0.543
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.