STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000002795Retinoblastoma binding protein 5. (475 aa)    
Predicted Functional Partners:
CCH79_00001264
B30.2/SPRY domain-containing protein.
    
 0.999
CCH79_00020699
Uncharacterized protein.
    
 0.998
CCH79_00000699
WD_REPEATS_REGION domain-containing protein.
   
 0.990
CCH79_00013208
Uncharacterized protein.
    
 0.983
H4C7
H4 clustered histone 7.
    
 0.982
ENSGAFP00000011060
annotation not available
    
  0.979
ENSGAFP00000021072
Ribosomal protein S27a.
    
  0.979
CCH79_00002111
JmjC domain-containing protein.
    
 0.977
KDM6B
Lysine demethylase 6B.
    
 0.977
CCH79_00017130
Uncharacterized protein.
    
 0.977
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.