STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016786Uncharacterized protein. (1448 aa)    
Predicted Functional Partners:
CCH79_00007436
Uncharacterized protein.
    
 0.749
PTK7
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.701
ENSGAFP00000012778
Receptor tyrosine kinase-like orphan receptor 1.
    
 0.680
CCH79_00003085
Uncharacterized protein.
   
  0.670
CCH79_00001690
Uncharacterized protein.
   
  0.670
CCH79_00005534
Ig-like domain-containing protein.
   
  0.670
CCH79_00012720
Uncharacterized protein.
    
 0.666
CCH79_00008501
Uncharacterized protein.
    
 0.666
ENSGAFP00000012200
KIT proto-oncogene, receptor tyrosine kinase b.
    
  0.655
ENSGAFP00000012937
Colony stimulating factor 1 receptor, a.
    
  0.655
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.