STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016354Uncharacterized protein. (366 aa)    
Predicted Functional Partners:
ILK
Uncharacterized protein.
   
 0.991
CCH79_00002277
Uncharacterized protein.
   
 0.987
ENSGAFP00000008947
Paxillin b.
   
 0.954
CCH79_00013689
Uncharacterized protein.
    
 0.917
CCH79_00008289
Integrin beta.
   
 0.915
CCH79_00009749
Integrin beta; Belongs to the integrin beta chain family.
   
 0.913
CCH79_00003042
Integrin beta; Belongs to the integrin beta chain family.
   
 0.913
ENSGAFP00000017259
Integrin, beta 6.
   
 0.913
CCH79_00008484
Integrin beta.
   
 0.909
CCH79_00017179
Integrin beta; Belongs to the integrin beta chain family.
   
 0.907
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.