STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017104Uncharacterized protein. (443 aa)    
Predicted Functional Partners:
CCH79_00005153
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.675
CCH79_00000808
CHCH domain-containing protein.
    
  0.649
CCH79_00014418
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
    
  0.631
CCH79_00012783
Tartrate-resistant acid phosphatase type 5.
   
 0.629
CCH79_00004566
Purple acid phosphatase.
   
 0.629
CCH79_00019035
Uncharacterized protein.
    
 0.628
CCH79_00012622
Uncharacterized protein.
    
 0.627
CCH79_00009024
Uncharacterized protein.
   
 0.614
CCH79_00014139
Uncharacterized protein; Belongs to the complex I LYR family.
    
  0.613
CCH79_00019331
Uncharacterized protein.
    
  0.613
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.