STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003775GMP_PDE_delta domain-containing protein. (250 aa)    
Predicted Functional Partners:
CCH79_00011623
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.942
CCH79_00003140
Uncharacterized protein.
    
 0.921
ENSGAFP00000015655
annotation not available
    
 0.921
CCH79_00006056
Uncharacterized protein.
    
 0.851
ENSGAFP00000005224
Nephronophthisis 3.
    
 0.707
CCH79_00011126
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
     
 0.692
ENSGAFP00000016477
Tubulin folding cofactor C.
     
 0.632
CCH79_00016842
GMP_PDE_delta domain-containing protein.
  
   
 0.626
ENSGAFP00000014151
annotation not available
      
 0.598
CCH79_00004429
Uncharacterized protein.
      
 0.598
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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