STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001156TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (596 aa)    
Predicted Functional Partners:
CCH79_00010441
Death domain-containing protein.
    
 0.958
CCH79_00010920
Uncharacterized protein.
    
 0.952
ENSGAFP00000029559
CD40 molecule, TNF receptor superfamily member 5.
   
 0.926
ENSGAFP00000019919
TNF receptor-associated factor 6.
   
0.913
ENSGAFP00000018270
Tumor necrosis factor receptor superfamily, member 1B.
   
 0.910
CCH79_00005362
Uncharacterized protein.
   
 0.909
CCH79_00002829
TBD domain-containing protein.
    
 0.890
ENSGAFP00000001007
Baculoviral IAP repeat containing 2.
   
 0.879
CCH79_00005873
RING-type domain-containing protein.
   
 0.879
ENSGAFP00000021225
annotation not available
    
 0.871
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.