STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00009777OBG-type G domain-containing protein. (634 aa)    
Predicted Functional Partners:
CCH79_00001112
Uncharacterized protein.
   
 
 0.999
CCH79_00015369
TRASH domain-containing protein.
   
 
 0.999
CCH79_00013944
Uncharacterized protein.
   
  
 0.999
CCH79_00011530
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.999
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.999
CCH79_00000308
Brix domain-containing protein.
   
 
 0.998
CCH79_00020797
RRM domain-containing protein.
   
 
 0.998
CCH79_00000989
Brix domain-containing protein.
   
 
 0.998
ENSGAFP00000018588
MRT4 homolog, ribosome maturation factor.
   
 
 0.998
CCH79_00003541
Uncharacterized protein.
   
 
 0.998
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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