STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012072FAM83 domain-containing protein. (665 aa)    
Predicted Functional Partners:
ENSGAFP00000032398
Mitochondrial ribosomal protein L23.
   
 
 0.714
CCH79_00020631
Uncharacterized protein.
    
 
 0.674
CCH79_00014359
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 
 0.590
CCH79_00008798
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 
 0.580
ENSGAFP00000014772
Ubiquinol-cytochrome c reductase complex assembly factor 2.
    
 
 0.571
CCH79_00012071
Uncharacterized protein.
      
 0.529
CCH79_00013769
Uncharacterized protein; Belongs to the AAA ATPase family.
   
  
 0.505
ENSGAFP00000018407
Mitochondrial ribosomal protein S16.
   
    0.495
CCH79_00016775
Uncharacterized protein.
   
 
 0.489
CCH79_00014650
Uncharacterized protein.
   
 
 0.489
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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