STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004835PA domain-containing protein. (537 aa)    
Predicted Functional Partners:
CCH79_00013354
LIP1 domain-containing protein.
   
    0.621
ENSGAFP00000003278
Heterogeneous nuclear ribonucleoprotein L.
    
 
 0.589
CCH79_00002256
Uncharacterized protein.
    
 
 0.589
ENSGAFP00000001065
annotation not available
      
 0.551
ENSGAFP00000003782
Solute carrier family 31 member 2.
      
 0.544
ENSGAFP00000017563
MAP/microtubule affinity-regulating kinase 3a.
      
 0.508
CCH79_00001486
Rib_recp_KP_reg domain-containing protein.
    
 0.484
ENSGAFP00000008607
MAX dimerization protein 4.
      
 0.483
CCH79_00005914
BHLH domain-containing protein.
      
 0.483
MXI1-2
Uncharacterized protein.
      
 0.483
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.