STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019300Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (138 aa)    
Predicted Functional Partners:
CCH79_00014938
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.883
CCH79_00010135
FAD-binding FR-type domain-containing protein.
   
 0.881
ENSGAFP00000004580
Sulfite oxidase.
   
 
 0.862
ENSGAFP00000009346
annotation not available
   
 0.861
CCH79_00020233
FAD-binding FR-type domain-containing protein.
   
 0.861
CCH79_00003706
Uncharacterized protein.
   
 0.795
TDO2
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
     
 0.771
CCH79_00008437
FAD-binding FR-type domain-containing protein.
   
 0.738
CCH79_00003095
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
   
 0.734
CCH79_00008720
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.734
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.