ENSGAFP00000003217 protein (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGAFP00000003217

annotation not available (314 aa)

Predicted Functional Partners:

ENSGAFP00000013632

0.917

CCH79_00017959

0.905

CCH79_00016647

0.903

ENSGAFP00000012568

0.879

CCH79_00009733

0.869

CCH79_00007301

0.849

CCH79_00018318

0.810

ENSGAFP00000029930

0.760

MICOS10

0.760

CCH79_00006566

0.695

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00006566	CCH79_00007301	ENSGAFP00000007295	ENSGAFP00000004182	J domain-containing protein.	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.625
CCH79_00006566	CCH79_00009733	ENSGAFP00000007295	ENSGAFP00000031187	J domain-containing protein.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.608
CCH79_00006566	CCH79_00016647	ENSGAFP00000007295	ENSGAFP00000029002	J domain-containing protein.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.827
CCH79_00006566	CCH79_00017959	ENSGAFP00000007295	ENSGAFP00000029819	J domain-containing protein.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.615
CCH79_00006566	CCH79_00018318	ENSGAFP00000007295	ENSGAFP00000017023	J domain-containing protein.	Thioredoxin-like_fold domain-containing protein.	0.689
CCH79_00006566	ENSGAFP00000003217	ENSGAFP00000007295	ENSGAFP00000003217	J domain-containing protein.	annotation not available	0.695
CCH79_00006566	ENSGAFP00000012568	ENSGAFP00000007295	ENSGAFP00000012568	J domain-containing protein.	Coiled-coil-helix-coiled-coil-helix domain containing 6b.	0.541
CCH79_00006566	ENSGAFP00000013632	ENSGAFP00000007295	ENSGAFP00000013632	J domain-containing protein.	Coiled-coil-helix-coiled-coil-helix domain containing 3a.	0.696
CCH79_00006566	ENSGAFP00000029930	ENSGAFP00000007295	ENSGAFP00000029930	J domain-containing protein.	annotation not available	0.604
CCH79_00006566	MICOS10	ENSGAFP00000007295	ENSGAFP00000032073	J domain-containing protein.	Mitochondrial contact site and cristae organizing system subunit 10.	0.604
CCH79_00007301	CCH79_00006566	ENSGAFP00000004182	ENSGAFP00000007295	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	J domain-containing protein.	0.625
CCH79_00007301	CCH79_00009733	ENSGAFP00000004182	ENSGAFP00000031187	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.900
CCH79_00007301	CCH79_00016647	ENSGAFP00000004182	ENSGAFP00000029002	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.826
CCH79_00007301	CCH79_00017959	ENSGAFP00000004182	ENSGAFP00000029819	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.863
CCH79_00007301	CCH79_00018318	ENSGAFP00000004182	ENSGAFP00000017023	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Thioredoxin-like_fold domain-containing protein.	0.676
CCH79_00007301	ENSGAFP00000003217	ENSGAFP00000004182	ENSGAFP00000003217	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	annotation not available	0.849
CCH79_00007301	ENSGAFP00000012568	ENSGAFP00000004182	ENSGAFP00000012568	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Coiled-coil-helix-coiled-coil-helix domain containing 6b.	0.781
CCH79_00007301	ENSGAFP00000013632	ENSGAFP00000004182	ENSGAFP00000013632	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Coiled-coil-helix-coiled-coil-helix domain containing 3a.	0.844
CCH79_00007301	ENSGAFP00000029930	ENSGAFP00000004182	ENSGAFP00000029930	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	annotation not available	0.763
CCH79_00007301	MICOS10	ENSGAFP00000004182	ENSGAFP00000032073	MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Mitochondrial contact site and cristae organizing system subunit 10.	0.763