STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00005472Clusterin; Belongs to the clusterin family. (464 aa)    
Predicted Functional Partners:
CCH79_00016365
Uncharacterized protein.
   
  
 0.829
ENSGAFP00000011866
Retinol binding protein 3.
   
  
 0.829
CCH79_00010691
Uncharacterized protein.
   
    0.822
ENSGAFP00000016551
Opsin 1 (cone pigments), short-wave-sensitive 2.
   
    0.776
ENSGAFP00000029802
Opsin 1 (cone pigments), short-wave-sensitive 2.
   
    0.776
CCH79_00014974
Uncharacterized protein.
   
    0.645
CCH79_00016376
Uncharacterized protein.
    
 
 0.619
CCH79_00015122
Uncharacterized protein.
   
 
 0.603
ENSGAFP00000008820
annotation not available
      
 0.585
APP
BPTI/Kunitz inhibitor domain-containing protein.
    
 0.538
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.