STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00006497MFS domain-containing protein. (460 aa)    
Predicted Functional Partners:
RIMS2
Uncharacterized protein.
     
 0.702
ENSGAFP00000018943
annotation not available
     
 0.702
CCH79_00014069
Uncharacterized protein.
     
 0.702
CCH79_00003083
MFS domain-containing protein.
     
 0.578
ENSGAFP00000014090
Solute carrier family 18 member 3a.
     
 0.578
CCH79_00000522
Aa_trans domain-containing protein.
     
 0.525
ENSGAFP00000020753
Solute carrier family 32 member 1.
     
 0.525
CCH79_00010582
Aa_trans domain-containing protein.
     
 0.525
ENSGAFP00000004273
Vesicle-associated membrane protein 1.
   
 
 0.518
CCH79_00002114
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.518
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.