STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000003286phenylalanyl-tRNA synthetase 2, mitochondrial. (426 aa)    
Predicted Functional Partners:
CCH79_00012180
B5 domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.998
CCH79_00016854
B3_4 domain-containing protein.
  
 0.991
CCH79_00014690
AA_TRNA_LIGASE_II domain-containing protein.
   
 
0.945
CCH79_00008519
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.921
CCH79_00004814
Uncharacterized protein.
  
  
 0.901
CCH79_00005120
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.794
CCH79_00011720
Tyrosine--tRNA ligase.
  
  
 0.788
CCH79_00003546
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.783
CCH79_00005006
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
  
 
 0.773
CCH79_00013580
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.761
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.