STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000003293Target of myb1 like 2 membrane trafficking protein. (387 aa)    
Predicted Functional Partners:
CCH79_00018028
CUE domain-containing protein.
    
 
 0.743
CCH79_00000142
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.732
ENSGAFP00000023260
ADP-ribosylation factor 6b.
    
 0.732
ENSGAFP00000025463
ADP-ribosylation factor-like 15a.
    
 0.732
CCH79_00015149
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.704
ENSGAFP00000019137
Myosin VIa.
    
 
 0.704
CCH79_00013594
Uncharacterized protein.
    
 0.682
CCH79_00011923
Uncharacterized protein.
    
 0.682
ENSGAFP00000006400
annotation not available
    
  0.679
ENSGAFP00000006438
annotation not available
    
  0.679
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.