STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019432Uncharacterized protein. (217 aa)    
Predicted Functional Partners:
CCH79_00017115
Uncharacterized protein.
    
 
 0.951
CCH79_00013044
Uncharacterized protein.
    
 
 0.891
CCH79_00018099
Uncharacterized protein.
    
 
 0.891
CCH79_00006499
Uncharacterized protein.
    
 
 0.874
CCH79_00006706
Uncharacterized protein.
    
 
 0.874
CCH79_00005927
Uncharacterized protein.
    
 
 0.826
CCH79_00000066
Uncharacterized protein.
    
 
 0.798
SPRYD3
SPRY domain containing 3.
    
 
 0.737
CCH79_00018700
B30.2/SPRY domain-containing protein.
    
 
 0.737
CCH79_00016268
FBPase domain-containing protein.
    
 
 0.662
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.