STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004357CP2 domain-containing protein. (554 aa)    
Predicted Functional Partners:
ENSGAFP00000022627
Exosome component 9.
      
 0.595
ENSGAFP00000032120
Interferon regulatory factor 6.
    
 
 0.548
CCH79_00008346
zf-C2H2_7 domain-containing protein.
   
  
 0.542
CCH79_00001591
Protein kinase domain-containing protein.
     
 0.484
CHUK
Protein kinase domain-containing protein.
     
 0.484
CCH79_00008737
Uncharacterized protein.
      
 0.480
ENSGAFP00000009632
annotation not available
    
 
 0.450
ENSGAFP00000019051
Homeobox B6a.
    
 
 0.450
CCH79_00009193
Uncharacterized protein.
   
  0.433
CCH79_00006805
Nucleolar protein 6.
   
 
  0.425
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.