STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00006500Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
CCH79_00008781
Uncharacterized protein.
    
  
0.621
CCH79_00020009
Uncharacterized protein.
   
 
  0.619
CCH79_00005834
Uncharacterized protein; Belongs to the synaptobrevin family.
     
 0.604
CCH79_00014092
ANK_REP_REGION domain-containing protein.
    
  0.600
CCH79_00001485
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 
  0.561
CCH79_00007746
PX domain-containing protein.
   
 
  0.561
CCH79_00000090
Uncharacterized protein.
    
 
0.546
ENSGAFP00000001510
Mal, T cell differentiation protein 2 (gene/pseudogene).
   
 
 0.492
ENSGAFP00000001855
Negative regulator of ubiquitin-like proteins 1.
      
 0.476
CCH79_00002648
Uncharacterized protein.
    
   0.459
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.