STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012844PAPA-1 domain-containing protein. (343 aa)    
Predicted Functional Partners:
ENSGAFP00000032225
RuvB-like AAA ATPase 1.
    
 0.951
CCH79_00010583
Uncharacterized protein; Belongs to the actin family.
    
 0.942
CCH79_00007682
YL1_C domain-containing protein.
    
 0.931
CCH79_00002203
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.919
CCH79_00010562
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.869
CCH79_00000120
Uncharacterized protein.
    
  0.802
ENSGAFP00000031850
Si:ch211-190p8.2.
    
   0.755
CCH79_00007090
Uncharacterized protein; Belongs to the actin family.
    
 0.753
CCH79_00001911
NFRKB_winged domain-containing protein.
     
  0.739
CCH79_00015444
Uncharacterized protein.
     
  0.723
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.