STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012846PDZ domain-containing protein. (960 aa)    
Predicted Functional Partners:
CCH79_00002878
Uncharacterized protein.
   
 0.989
CCH79_00018746
Uncharacterized protein.
   
 0.979
CCH79_00019248
TPR_REGION domain-containing protein.
  
 0.965
CCH79_00002526
TPR_REGION domain-containing protein.
   
 0.963
CCH79_00011168
Uncharacterized protein.
   
 0.961
ENSGAFP00000028974
Ubiquitin-conjugating enzyme E2C.
   
 0.960
CCH79_00001942
Uncharacterized protein.
  
 0.959
CCH79_00015790
APC1_C domain-containing protein.
    
 0.957
CCH79_00013911
Uncharacterized protein.
   
 0.953
CCH79_00018626
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.952
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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