STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019580Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
CCH79_00019579
Uncharacterized protein.
 
 
 0.954
CCH79_00016660
Uncharacterized protein.
   
 
 0.806
CCH79_00005330
Uncharacterized protein.
 
   
 0.799
ENSGAFP00000010805
annotation not available
    
 0.771
CCH79_00008484
Integrin beta.
    
  0.762
ENSGAFP00000017259
Integrin, beta 6.
    
  0.758
CCH79_00001520
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
  0.746
CCH79_00002515
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
  0.746
ENSGAFP00000027083
Dystroglycan 1.
    
 0.741
CCH79_00006699
Peptidase S72 domain-containing protein.
    
 0.741
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.