STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00005481Uncharacterized protein. (1500 aa)    
Predicted Functional Partners:
CCH79_00010898
Uncharacterized protein.
    
 0.757
CCH79_00007589
Uncharacterized protein.
   
 0.589
ENSGAFP00000007026
Protein tyrosine phosphatase non-receptor type 11a.
   
  0.578
CCH79_00018958
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.578
CCH79_00010931
Uncharacterized protein.
   
  0.578
CCH79_00009670
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
     
 0.541
CCH79_00001222
Uncharacterized protein.
    
 0.517
CCH79_00012303
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.517
CCH79_00011595
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.515
CCH79_00000068
Alpha-galactosidase.
      
 0.513
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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