STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001386PWWP domain-containing protein. (624 aa)    
Predicted Functional Partners:
ENSGAFP00000025233
Transmembrane protein 251.
      
 0.582
ENSGAFP00000010669
RNA binding motif protein 12B.
      
 0.512
ENSGAFP00000003559
Ankyrin repeat and SOCS box-containing 12b.
      
 0.491
CCH79_00006018
RING-type domain-containing protein.
      
 0.481
CCH79_00003488
Uncharacterized protein.
      
 0.479
CCH79_00004939
Serine/threonine-protein phosphatase.
      
 0.441
ENSGAFP00000011554
Zgc:153215.
      
 0.418
ENSGAFP00000029533
G protein-coupled receptor 101.
      
 0.418
CCH79_00012742
Uncharacterized protein.
      
 0.407
CCH79_00009257
WD_REPEATS_REGION domain-containing protein.
      
 0.407
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.