STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000003626Cullin 2. (286 aa)    
Predicted Functional Partners:
CCH79_00005306
UBX domain-containing protein.
    
 0.998
CCH79_00004240
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.986
ENSGAFP00000032239
Von Hippel-Lindau tumor suppressor.
    
 0.980
ENSGAFP00000022428
NEDD8 ubiquitin like modifier, like.
    
 0.976
CCH79_00004902
PCI domain-containing protein.
   
  0.966
CCH79_00008099
Ubiquitin-like domain-containing protein.
    
 0.959
ELOB
Ubiquitin-like domain-containing protein.
    
 0.959
CCH79_00003696
RING-type domain-containing protein.
    
 0.956
CCH79_00013703
RING-type domain-containing protein.
    
 0.956
CCH79_00003493
PCI domain-containing protein.
   
  0.945
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.