STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003029Uncharacterized protein. (1378 aa)    
Predicted Functional Partners:
CCH79_00002369
Uncharacterized protein.
    
 0.677
CCH79_00012071
Uncharacterized protein.
    
 0.677
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 0.677
ENSGAFP00000030075
annotation not available
    
 0.677
CCH79_00008198
RING-type domain-containing protein.
   
 
 0.660
CCH79_00017810
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.659
CCH79_00000236
Platelet-activating factor acetylhydrolase.
     
 0.531
CCH79_00003135
RING-type domain-containing protein.
   
 
 0.521
CCH79_00015157
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 
  0.481
CCH79_00020825
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 
  0.472
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.