STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007530GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (112 aa)    
Predicted Functional Partners:
CCH79_00018938
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
    
 
 0.974
CCH79_00010170
RPOLD domain-containing protein.
  
 
 0.907
CCH79_00004381
Uncharacterized protein.
    
 
 0.904
CCH79_00019189
RNA_pol_L_2 domain-containing protein.
    
 
 0.870
ENSGAFP00000007177
Intersectin 2a.
    
 0.855
CCH79_00006118
Uncharacterized protein.
    
 0.855
ENSGAFP00000012493
Intersectin 2b.
    
 0.855
ENSGAFP00000024448
annotation not available
   
 
 0.830
POLR2B
Uncharacterized protein; Belongs to the RNA polymerase beta chain family.
   
 
 0.830
CCH79_00005079
Uncharacterized protein.
   
 
 0.827
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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