STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004842DUF4210 domain-containing protein. (1082 aa)    
Predicted Functional Partners:
CCH79_00008219
Uncharacterized protein.
      
 0.543
CCH79_00015369
TRASH domain-containing protein.
      
 0.534
CCH79_00015363
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
      
 0.517
CCH79_00015370
Uncharacterized protein.
      
 0.517
CCH79_00007293
HMG box domain-containing protein.
      
 0.517
CCH79_00019103
Uncharacterized protein.
      
 0.517
CCH79_00019110
Uncharacterized protein.
      
 0.517
CCH79_00005193
BTB domain-containing protein.
      
 0.517
MEX3D
RING-type domain-containing protein.
      
 0.517
CCH79_00010998
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.517
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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