STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000668Arrestin_C domain-containing protein. (438 aa)    
Predicted Functional Partners:
ENSGAFP00000004595
annotation not available
    
 0.771
CCH79_00012874
Thioredoxin domain-containing protein.
    
 0.771
ENSGAFP00000015750
NME/NM23 family member 8.
    
 0.641
CCH79_00021019
Uncharacterized protein.
    
 0.636
ENSGAFP00000021916
Thioredoxin 2.
    
 0.636
ENSGAFP00000002331
annotation not available
    
 0.605
ENSGAFP00000007739
annotation not available
    
 0.605
ENSGAFP00000032381
Zgc:123278.
    
 
 0.586
CCH79_00010035
Uncharacterized protein.
    
 
 0.586
ENSGAFP00000002403
WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.584
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.