STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008636UPAR/Ly6 domain-containing protein. (127 aa)    
Predicted Functional Partners:
ENSGAFP00000005191
Defensin, beta-like 2.
  
     0.518
CCH79_00004045
Bulb-type lectin domain-containing protein.
  
     0.458
CCH79_00018899
Uncharacterized protein.
  
     0.447
CCH79_00007711
UPAR/Ly6 domain-containing protein.
  
     0.430
ENSGAFP00000028177
annotation not available
  
     0.427
CCH79_00014314
Sushi domain-containing protein.
  
     0.425
CCH79_00008076
B30.2/SPRY domain-containing protein.
  
     0.422
CCH79_00003989
Uncharacterized protein.
  
     0.400
ENSGAFP00000032297
Apolipoprotein F.
  
     0.400
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.