STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016301Uncharacterized protein. (917 aa)    
Predicted Functional Partners:
CCH79_00016624
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.948
CCH79_00010558
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.948
CCH79_00012290
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.936
CCH79_00014963
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.908
ENSGAFP00000012500
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb.
    
 0.885
ENSGAFP00000016109
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa.
    
 0.885
ENSGAFP00000002623
Si:dkey-49n23.1.
    
 0.884
CCH79_00012289
Uncharacterized protein.
    
 0.884
CCH79_00012291
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.861
CCH79_00010559
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.861
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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