STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00014149Triosephosphate isomerase. (247 aa)    
Predicted Functional Partners:
CCH79_00007410
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.995
CCH79_00010917
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.995
CCH79_00014154
Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.993
CCH79_00006208
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.992
CCH79_00016947
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.992
ENSGAFP00000011020
annotation not available
  
 0.990
CCH79_00010494
Suf domain-containing protein.
  
 0.989
CCH79_00006254
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.980
CCH79_00014810
TRANSKETOLASE_1 domain-containing protein.
  
 0.964
ENSGAFP00000016341
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 
 0.964
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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