STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007294Tr-type G domain-containing protein. (860 aa)    
Predicted Functional Partners:
CCH79_00012598
Uncharacterized protein.
   
 
 0.999
CCH79_00000140
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.998
ENSGAFP00000031994
Ribosomal protein, large, P0.
  
 0.995
CCH79_00014707
Uncharacterized protein.
  
 0.994
CCH79_00014620
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.994
CCH79_00015289
Ribos_L4_asso_C domain-containing protein.
  
 0.994
ENSGAFP00000007574
Ribosomal protein S6.
   
 0.993
CCH79_00018213
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.993
CCH79_00002516
Ribosomal_L2_C domain-containing protein.
  
 0.993
CCH79_00006035
WD_REPEATS_REGION domain-containing protein.
   
 
 0.992
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.