STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013130Uncharacterized protein. (242 aa)    
Predicted Functional Partners:
CCH79_00001617
NUC173 domain-containing protein.
    
 
 0.931
CCH79_00000140
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.929
ENSGAFP00000032089
Bystin-like.
    
 
 0.911
CCH79_00013944
Uncharacterized protein.
    
 
 0.881
CCH79_00003908
Methyltransf_11 domain-containing protein.
    
   0.863
CCH79_00012553
Uncharacterized protein.
   
   0.823
CCH79_00020494
Uncharacterized protein.
    
   0.792
CCH79_00006931
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
   0.779
CCH79_00015813
Uncharacterized protein.
    
 
 0.774
CCH79_00010310
Bms1-type G domain-containing protein.
    
 
 0.774
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.