STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000003975Si:dkey-83h2.3. (196 aa)    
Predicted Functional Partners:
ENSGAFP00000003687
Nuclear receptor subfamily 0, group B, member 2a.
   
  
 0.480
CCH79_00018067
Uncharacterized protein.
   
    0.461
CCH79_00016660
Uncharacterized protein.
   
    0.454
ENSGAFP00000000448
annotation not available
  
     0.435
CCH79_00000043
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
    0.431
CCH79_00010214
Par3_HAL_N_term domain-containing protein.
   
    0.429
CCH79_00013570
Nucleoside diphosphate kinase.
   
    0.406
CCH79_00003425
Uncharacterized protein.
   
    0.402
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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