STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000003978Nuclear transport factor 2-like export factor 2. (167 aa)    
Predicted Functional Partners:
CCH79_00012555
Uncharacterized protein.
    
 0.999
CCH79_00002878
Uncharacterized protein.
   
 0.992
CCH79_00000966
Nup214_FG domain-containing protein.
    
 0.884
ENSGAFP00000030172
Ribonucleic acid export 1.
   
 
 0.848
ENSGAFP00000009462
RAN binding protein 1.
   
 0.819
CCH79_00013604
RRM domain-containing protein.
   
 0.805
CCH79_00013270
Uncharacterized protein.
    
 0.804
CCH79_00006957
Uncharacterized protein.
     
 0.793
CCH79_00012541
WD_REPEATS_REGION domain-containing protein.
   
 
 0.792
NUP62
Nucleoporin 62.
    
 0.782
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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