STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002749BTB domain-containing protein. (562 aa)    
Predicted Functional Partners:
CCH79_00005306
UBX domain-containing protein.
    
  0.658
CCH79_00010794
PHTB1_N domain-containing protein.
    
 0.640
CCH79_00016885
Uncharacterized protein.
    
 0.631
CCH79_00004517
TPR_REGION domain-containing protein.
    
 0.608
CCH79_00005567
Uncharacterized protein.
    
 0.607
CCH79_00017214
Uncharacterized protein.
      
 0.588
ENSGAFP00000032160
SLIT-ROBO Rho GTPase activating protein 3.
      
 0.583
CCH79_00006912
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.568
CCH79_00014844
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.551
CCH79_00003314
PB1 domain-containing protein.
    
 0.549
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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