STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012860Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
RIC1
RIC1 domain-containing protein.
    
 0.999
CCH79_00020382
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.812
CCH79_00002054
Uncharacterized protein.
    
 0.809
CCH79_00005296
Uncharacterized protein.
    
 0.809
CCH79_00011090
Uncharacterized protein.
    
 0.809
CCH79_00005648
Uncharacterized protein.
    
 0.809
CCH79_00012112
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.781
CCH79_00014112
Uncharacterized protein.
     
 0.779
CCH79_00003760
Vps53_N domain-containing protein.
     
 0.774
ENSGAFP00000005586
Syntaxin 16.
    
 0.767
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.