STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8TBC1 domain family member 8. (1120 aa)    
Predicted Functional Partners:
CCH79_00009024
Uncharacterized protein.
   
 
  0.983
CCH79_00009447
Uncharacterized protein.
   
 
  0.643
CCH79_00020343
Protein YIPF.
   
 
  0.624
CCH79_00000610
Fibronectin type-II domain-containing protein.
   
 
  0.616
CCH79_00019944
B2-adapt-app_C domain-containing protein.
   
 
  0.614
CCH79_00010697
Sortilin.
    
  0.614
ENSGAFP00000010536
annotation not available
    
  0.614
CCH79_00020009
Uncharacterized protein.
     
 0.613
CCH79_00017607
Uncharacterized protein.
   
 
  0.594
CCH79_00009091
Uncharacterized protein.
   
 
  0.594
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.