Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003666Uncharacterized protein; Belongs to the cyclin family. (1060 aa)    
Predicted Functional Partners:
CCH79_00016888
Protein kinase domain-containing protein.
   
 
 0.905
CCH79_00010179
Protein kinase domain-containing protein.
   
 
 0.905
CCH79_00003465
Uncharacterized protein.
    
   0.879
CCH79_00014691
Uncharacterized protein.
    
   0.836
CCH79_00000062
G-patch domain-containing protein.
   
 
 0.782
CCH79_00000359
Poly [ADP-ribose] polymerase.
    
 
 0.769
ENSGAFP00000013226
PRP40 pre-mRNA processing factor 40 homolog A.
   
   0.767
CCH79_00020164
Uncharacterized protein.
   
  
 0.722
CCH79_00007117
Uncharacterized protein.
    
 
 0.722
CCH79_00020790
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
   0.718
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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