Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000004100annotation not available (312 aa)    
Predicted Functional Partners:
CCH79_00014356
RIC3 domain-containing protein.
      
 0.726
CCH79_00018357
Uncharacterized protein.
      
 0.726
CCH79_00003034
Uncharacterized protein.
      
 0.718
CCH79_00003080
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.718
CCH79_00002214
Uncharacterized protein.
      
 0.715
CCH79_00003035
Thioredoxin domain-containing protein.
      
 0.714
ENSGAFP00000026300
Leptin receptor overlapping transcript like 1.
      
 0.714
CCH79_00003036
Lactamase_B domain-containing protein.
      
 0.712
ENSGAFP00000005840
annotation not available
      
 0.686
CCH79_00003307
ZP domain-containing protein.
      
 0.660
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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