STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008310Uncharacterized protein. (584 aa)    
Predicted Functional Partners:
CCH79_00000345
Uncharacterized protein.
  
 
 0.937
CCH79_00015458
Uncharacterized protein.
  
 
 0.927
CCH79_00007879
Uncharacterized protein.
    
 0.920
CCH79_00018268
LRAT domain-containing protein.
     
 0.907
CCH79_00004976
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.901
ENSGAFP00000022820
Dehydrogenase/reductase (SDR family) member 3b.
    
 0.899
CCH79_00012882
Uncharacterized protein.
  
 
 0.894
CCH79_00016711
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
 0.894
CCH79_00013863
LRAT domain-containing protein.
    
 0.891
CCH79_00017338
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.891
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.