STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002388Prenylcys_lyase domain-containing protein. (405 aa)    
Predicted Functional Partners:
CCH79_00000830
Prenylcys_lyase domain-containing protein.
  
  
 
0.952
CCH79_00013109
Uncharacterized protein.
     
 0.715
CCH79_00010465
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
      
 0.481
CCH79_00004550
3'-5' exonuclease domain-containing protein.
      
 0.477
CCH79_00006424
Uncharacterized protein; Belongs to the arginase family.
      
 0.416
ENSGAFP00000022196
FAD-dependent oxidoreductase domain containing 2.
      
 0.408
CCH79_00007848
Cytochrome b5 heme-binding domain-containing protein.
      
 0.407
ENSGAFP00000011020
annotation not available
      
 0.404
CCH79_00012427
Uncharacterized protein.
   
  
 0.403
CCH79_00017560
C2 domain-containing protein.
      
 0.402
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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