STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000004213Forkhead box J1b. (344 aa)    
Predicted Functional Partners:
ENSGAFP00000004580
Sulfite oxidase.
     
 0.657
ENSGAFP00000009315
Serum/glucocorticoid regulated kinase family member 3.
    
 0.635
CCH79_00005810
Uncharacterized protein.
    
  0.570
CCH79_00002220
Uncharacterized protein.
    
 0.541
ENSGAFP00000032000
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase).
    
 0.538
CCH79_00001359
Deacetylase sirtuin-type domain-containing protein.
    
 0.531
CCH79_00013527
Deacetylase sirtuin-type domain-containing protein.
    
 0.525
SIRT5
NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
    
 0.525
CCH79_00004638
Rhodanese domain-containing protein.
   
  0.523
CCH79_00007980
Uncharacterized protein.
    
 0.522
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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