STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004848Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
CCH79_00012485
Uncharacterized protein.
    
 
0.911
ENSGAFP00000009939
annotation not available
     
 0.738
CCH79_00018456
Uncharacterized protein.
     
0.610
CCH79_00010948
Uncharacterized protein.
    
 
 0.607
ENSGAFP00000029559
CD40 molecule, TNF receptor superfamily member 5.
    
 0.568
CCH79_00006570
TNFR-Cys domain-containing protein.
      
 0.544
CCH79_00005665
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
      
 0.544
ENSGAFP00000031947
annotation not available
      
 0.525
CCH79_00012871
HAUS-augmin3 domain-containing protein.
    
 0.492
CCH79_00002296
Uncharacterized protein.
    
 0.489
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.