ENSGAFP00000004321 protein (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGAFP00000004321

Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b. (413 aa)

Predicted Functional Partners:

CCH79_00002300

0.961

CCH79_00001735

0.958

CCH79_00013329

0.955

CCH79_00015506

0.953

ACTN4

0.951

CCH79_00007901

0.951

CCH79_00005423

0.949

CCH79_00004714

0.948

CCH79_00011003

0.936

CCH79_00008308

0.920

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTN4	CCH79_00007901	ENSGAFP00000006469	ENSGAFP00000026953	Uncharacterized protein.	Uncharacterized protein.	0.951
ACTN4	CCH79_00011003	ENSGAFP00000006469	ENSGAFP00000022311	Uncharacterized protein.	PIPK domain-containing protein.	0.951
ACTN4	ENSGAFP00000004321	ENSGAFP00000006469	ENSGAFP00000004321	Uncharacterized protein.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.	0.951
CCH79_00001735	CCH79_00002300	ENSGAFP00000015714	ENSGAFP00000028822	Uncharacterized protein.	SAC domain-containing protein.	0.959
CCH79_00001735	CCH79_00004714	ENSGAFP00000015714	ENSGAFP00000028936	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.674
CCH79_00001735	CCH79_00005423	ENSGAFP00000015714	ENSGAFP00000031894	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.674
CCH79_00001735	CCH79_00008308	ENSGAFP00000015714	ENSGAFP00000004065	Uncharacterized protein.	Phosphoinositide phospholipase C.	0.945
CCH79_00001735	CCH79_00011003	ENSGAFP00000015714	ENSGAFP00000022311	Uncharacterized protein.	PIPK domain-containing protein.	0.958
CCH79_00001735	CCH79_00013329	ENSGAFP00000015714	ENSGAFP00000012800	Uncharacterized protein.	IPPc domain-containing protein.	0.953
CCH79_00001735	ENSGAFP00000004321	ENSGAFP00000015714	ENSGAFP00000004321	Uncharacterized protein.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.	0.958
CCH79_00002300	CCH79_00001735	ENSGAFP00000028822	ENSGAFP00000015714	SAC domain-containing protein.	Uncharacterized protein.	0.959
CCH79_00002300	CCH79_00008308	ENSGAFP00000028822	ENSGAFP00000004065	SAC domain-containing protein.	Phosphoinositide phospholipase C.	0.945
CCH79_00002300	CCH79_00011003	ENSGAFP00000028822	ENSGAFP00000022311	SAC domain-containing protein.	PIPK domain-containing protein.	0.961
CCH79_00002300	CCH79_00013329	ENSGAFP00000028822	ENSGAFP00000012800	SAC domain-containing protein.	IPPc domain-containing protein.	0.958
CCH79_00002300	ENSGAFP00000004321	ENSGAFP00000028822	ENSGAFP00000004321	SAC domain-containing protein.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.	0.961
CCH79_00004714	CCH79_00001735	ENSGAFP00000028936	ENSGAFP00000015714	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Uncharacterized protein.	0.674
CCH79_00004714	CCH79_00005423	ENSGAFP00000028936	ENSGAFP00000031894	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.951
CCH79_00004714	CCH79_00011003	ENSGAFP00000028936	ENSGAFP00000022311	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	PIPK domain-containing protein.	0.947
CCH79_00004714	ENSGAFP00000004321	ENSGAFP00000028936	ENSGAFP00000004321	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.	0.948
CCH79_00005423	CCH79_00001735	ENSGAFP00000031894	ENSGAFP00000015714	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Uncharacterized protein.	0.674