STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008641Uncharacterized protein. (757 aa)    
Predicted Functional Partners:
CCH79_00019910
Uncharacterized protein.
   
 0.880
CCH79_00011319
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.827
CCH79_00011031
SCP2 domain-containing protein.
   
 0.827
ENSGAFP00000025571
annotation not available
   
 0.818
ENSGAFP00000029611
annotation not available
   
 0.818
CCH79_00012525
Uncharacterized protein.
   
 0.791
CCH79_00011032
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
0.785
CCH79_00016660
Uncharacterized protein.
   
  
 0.772
CCH79_00020787
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
  
 
0.741
ENSGAFP00000028436
Peroxisomal biogenesis factor 14.
    
 0.734
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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