ENSGAFP00000004338 protein (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGAFP00000004338

annotation not available (582 aa)

Predicted Functional Partners:

ENSGAFP00000030927

0.871

NCSTN

0.753

ENSGAFP00000024874

0.736

CCH79_00008025

0.736

ENSGAFP00000030936

0.731

CCH79_00012555

0.725

CCH79_00008680

0.723

ENSGAFP00000022473

0.714

ENSGAFP00000030928

0.709

CCH79_00012918

0.708

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00008025	ENSGAFP00000004338	ENSGAFP00000027820	ENSGAFP00000004338	RING-type domain-containing protein.	annotation not available	0.736
CCH79_00008025	ENSGAFP00000030936	ENSGAFP00000027820	ENSGAFP00000030936	RING-type domain-containing protein.	annotation not available	0.736
CCH79_00008680	ENSGAFP00000004338	ENSGAFP00000006642	ENSGAFP00000004338	Uncharacterized protein.	annotation not available	0.723
CCH79_00008680	ENSGAFP00000030936	ENSGAFP00000006642	ENSGAFP00000030936	Uncharacterized protein.	annotation not available	0.723
CCH79_00012555	ENSGAFP00000004338	ENSGAFP00000024790	ENSGAFP00000004338	Uncharacterized protein.	annotation not available	0.725
CCH79_00012555	ENSGAFP00000030927	ENSGAFP00000024790	ENSGAFP00000030927	Uncharacterized protein.	annotation not available	0.597
CCH79_00012555	ENSGAFP00000030928	ENSGAFP00000024790	ENSGAFP00000030928	Uncharacterized protein.	annotation not available	0.597
CCH79_00012555	ENSGAFP00000030936	ENSGAFP00000024790	ENSGAFP00000030936	Uncharacterized protein.	annotation not available	0.725
CCH79_00012918	ENSGAFP00000004338	ENSGAFP00000006457	ENSGAFP00000004338	Uncharacterized protein.	annotation not available	0.708
CCH79_00012918	ENSGAFP00000022473	ENSGAFP00000006457	ENSGAFP00000022473	Uncharacterized protein.	Recombination signal binding protein for immunoglobulin kappa J region-like.	0.900
CCH79_00012918	ENSGAFP00000030936	ENSGAFP00000006457	ENSGAFP00000030936	Uncharacterized protein.	annotation not available	0.708
ENSGAFP00000004338	CCH79_00008025	ENSGAFP00000004338	ENSGAFP00000027820	annotation not available	RING-type domain-containing protein.	0.736
ENSGAFP00000004338	CCH79_00008680	ENSGAFP00000004338	ENSGAFP00000006642	annotation not available	Uncharacterized protein.	0.723
ENSGAFP00000004338	CCH79_00012555	ENSGAFP00000004338	ENSGAFP00000024790	annotation not available	Uncharacterized protein.	0.725
ENSGAFP00000004338	CCH79_00012918	ENSGAFP00000004338	ENSGAFP00000006457	annotation not available	Uncharacterized protein.	0.708
ENSGAFP00000004338	ENSGAFP00000022473	ENSGAFP00000004338	ENSGAFP00000022473	annotation not available	Recombination signal binding protein for immunoglobulin kappa J region-like.	0.714
ENSGAFP00000004338	ENSGAFP00000024874	ENSGAFP00000004338	ENSGAFP00000024874	annotation not available	annotation not available	0.736
ENSGAFP00000004338	ENSGAFP00000030927	ENSGAFP00000004338	ENSGAFP00000030927	annotation not available	annotation not available	0.871
ENSGAFP00000004338	ENSGAFP00000030928	ENSGAFP00000004338	ENSGAFP00000030928	annotation not available	annotation not available	0.709
ENSGAFP00000004338	ENSGAFP00000030936	ENSGAFP00000004338	ENSGAFP00000030936	annotation not available	annotation not available	0.731