STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000004352annotation not available (99 aa)    
Predicted Functional Partners:
ENSGAFP00000024874
annotation not available
    
 0.736
CCH79_00008025
RING-type domain-containing protein.
    
 0.736
CCH79_00012555
Uncharacterized protein.
    
 0.725
CCH79_00008680
Uncharacterized protein.
    
 0.723
NCSTN
Ncstrn_small domain-containing protein.
    
 0.683
CCH79_00007578
Uncharacterized protein.
    
 0.659
CCH79_00007862
Uncharacterized protein.
    
 0.649
CCH79_00020698
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.649
ENSGAFP00000021519
annotation not available
    
 0.645
CCH79_00012918
Uncharacterized protein.
    
 0.630
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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